Hello,
I am new at Biocondurctor and trying to read, normalize and analyze a expression data from Illumina platform.
I have raw data (non-normalized) as text format and I want to read it with lumiR() command but when I try, I have this error:
Error in gregexpr("\t", dataLine1)[[1]] : subscript out of bounds
When I specify seperator as "\t", I have this error:
Error in strsplit(info[nMetaDataLines + 2], sep)[[1]] :
subscript out of bounds
I uploaded my data:
https://drive.google.com/open?id=0B_JS-1GnYihbRUJmTUVWWXNINUE
How can I read this data with lumiR() and normalize it?
Also, some datas are stored as seperated text files for each sample. How can I combine them?
This is my first post and I really need help,
Thank you