extracting data from flowmerge obj

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Entering edit mode

adlerj • 0

@adlerj-12765

Last seen 7.7 years ago

Hi,

It looks like there is a getdata method to extrct the original flowframe though I cant figure out how to use it: (q is a list of lists of flowmerge objects)

getData(obj = q[[1]][[1]],signature(obj = "flowMerge"))

Error in (function (classes, fdef, mtable) :

unable to find an inherited method for function ‘getData’ for signature ‘"list"’

Also, is there an easy way to record cluster inheritance ie if I wanted to rerun the algorithm on a subset of the data- somewhat like a dendrogram?

Thanks!

Jeremy

flowmerge • 904 views

ADD COMMENT • link 7.6 years ago adlerj • 0

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Entering edit mode

Figured out the extract data bit. I originally used a flowclust instead of flowmerge obj and the data could be extracted by exprs(getData((obj="flowmergeobject"))

Stil curious if there is a good way to preserve cluster inheritance within bioconductor though

ADD REPLY • link 7.6 years ago adlerj • 0

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