Michael, No, unfortunately there's nothing there... > names(RG) [1] "R" "G" "Rb" "Gb" "printer" "weights" "genes" > RG$other$Col NULL Regards Richard Quoting "michael watson (IAH-C)" <michael.watson at="" bbsrc.ac.uk="">: > Where did you try looking? > > They should be in somewhere like > > RG$other$Col > RG$other$Row > > etc > etc > > > -----Original Message----- > From: bioconductor-bounces at stat.math.ethz.ch on behalf of Richard Pearson > Sent: Tue 21/06/2005 4:51 PM > To: Richard Pearson > Cc: bioconductor at stat.math.ethz.ch > Subject: [BioC] other.columns with ImaGene data (Limma read.maimages) > I can't seem to get the other.columns to work in read.maimages. I have > limma version 2.0.0. I have tried the following command: > > RG <- read.maimages(files, source="imagene" > , other.columns=list(Col="Column",Row="Row",MetaCol="Meta > Column",MetaRow="Meta Row",Flag="Flag") > , wt.fun=mywtfun) > > This loads the intensity data fine but I have no "other" columns. I assume > the problem is that this will call the read.imagene function which doesn't > have an other.columns option - is this correct? Can anyone suggest a simple > work around (my R is fairly limited at present!)? > > Regards > > Richard > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor >