Hello,

We have performed transcriptome analysis , which resulted in a collection interesting genes.

The ultimate goal would be to find drugs that have the ability to influence these genes of interest.

After research we came up with the following website ( tool ) :

https://portals.broadinstitute.org/cmap/

This program does essentially what we want , yet we would like to delve deeper into the subject.

1. Are there any other good tools to use for this scenario ?

2. Another question , which is an extension of the prior one. Is it possible to do essentially the same as the connectivity map but using bioconductor packages, if so how ?

Regards,

Wim