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I can install other packages in Bioconductor, but not GO.db and org.Hs.eg.db. It always fails at lazy loading but it doesn't state why. I have tried uninstalling and reinstalling R, Rstudio, Bioconductor, and restarting my computer, R session.
> BiocManager::install('org.Hs.eg.db')
trying URL 'https://bioconductor.org/packages/3.20/data/annotation/src/contrib/org.Hs.eg.db_3.20.0.tar.gz'
Content type 'application/x-gzip' length 98233708 bytes (93.7 MB)
downloaded 93.7 MB
* installing *source* package 'org.Hs.eg.db' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
package 'IRanges' was built under R version 4.4.2
ERROR: lazy loading failed for package 'org.Hs.eg.db'
* removing 'C:/Users/gabri/R/win-library/4.4/org.Hs.eg.db'
> session_info()
R version 4.4.1 (2024-06-14 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 11 x64 (build 26100)
Matrix products: default
locale:
[1] LC_COLLATE=English_Singapore.utf8 LC_CTYPE=English_Singapore.utf8
[3] LC_MONETARY=English_Singapore.utf8 LC_NUMERIC=C
[5] LC_TIME=English_Singapore.utf8
time zone: Asia/Singapore
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] BiocManager_1.30.25 compiler_4.4.1 tools_4.4.1
The downloaded source packages are in 'C:Users\gabri\AppData\Local\Temp\RtmpailNer\downloaded_packages' Installation paths not writeable, unable to update packages path: C:/Program Files (x86)/R/R-4.4.1/library packages: boot, cluster, foreign, MASS, Matrix, nlme, survival Warning message: In install.packages(...) : installation of package 'org.Hs.eg.db' had non-zero exit status