Version map cannot be validated - not mapping to new bioconductor website
0
0
Entering edit mode
Alexander • 0
@4de25b09
Last seen 13 months ago
United States

When I submit the basic installation command for Bioconductor:

if (!require("BiocManager", quietly = TRUE)) 
install.packages("BiocManager") 
BiocManager::install(version = "3.18")

in R (version 4.3.0), I get the following error:

Error: Bioconductor version cannot be validated; no internet connection?  See #troubleshooting section in vignette

I've tried everything in the vignette for troubleshooting. None of the suggested solutions I've found online (adjusting the proxy/firewall settings, ensuring internet connection, etc) have helped either.

The documentation suggests that the version map can be found at https://bioconductor.org/config.yaml which, as of today (11/13/2023), cannot be reached. There is a version map I can reach through the new Bioconductor website at this link, though, https://new.bioconductor.org/config.yaml.

It seems like the version map cannot be validated because the bioconductor.org/config.yaml is a broken link, whereas the new.bioconductor.org/config.yaml would work. Can this be fixed?

Install • 1.0k views
ADD COMMENT

Login before adding your answer.

Traffic: 840 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6