Incorrect display of Y-axis
0
0
Entering edit mode
Bastien • 0
@b48981dc
Last seen 12 months ago
United Kingdom

Hi,

I am using trackViewer to display allele frequencies in a cohort by cDNA position.

The nodes are not aligning correctly to the Y axis. Same thing occurs when I log10 transform the values. Is there a problem with the axis scaling?

lolliplot(sample.gr,
          features, 
          ylab="Carriers      \n",
          label_on_feature=FALSE,
          cex=1, legend=legend, size=12,
          ylab.gp=ylab.gp, yaxis.gp=yaxis.gp,
          xlab.gp=ylab.gp, xaxis.gp=yaxis.gp,
          ranges = GRanges("chr3", IRanges(1, sequence_length)))

sample.gr scores are integers: 619 67 1 69 51 62 40 17 2

output

trackViewer • 451 views
ADD COMMENT
0
Entering edit mode

Hi Thank you for reporting this. The bug should be fixed in both release and development version. Let me know if you still experience any issues.

Jianhong.

ADD REPLY

Login before adding your answer.

Traffic: 662 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6