Question

DESeq2 Installation Issue

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joanna • 0

@00a6c986

Last seen 23 months ago

United States

When I load the DESeq2 package, this error shown in the attached image below occurs. Can anyone help me with it? I would really appreciate any help! Thank you! enter image description here

I am able to find the DESeq2 file in the local path, but it's unable to be loaded. The following image shows the sessionInfo() information: enter image description here

DESeq2 • 1.1k views

ADD COMMENT • link updated 23 months ago by Hervé Pagès 16k • written 23 months ago by joanna • 0

score 1 · Answer 1 · 2023-01-19

Hi Joanna,

This is clearly a problem with the DESeq2 binary package that we build and distribute for the Mac arm64 arch. Other packages seem to be affected. We're looking into the issue and will come back with more details soon.

In the mean time, you can install Xcode and re-install the package from source with BiocManager::install("DESeq2", type="source", force=TRUE).

Sorry for the inconvenience.

Cheers,

H.