Entering edit mode
Anyone in here, please help me >:((((
I tried to install ggtree with the given code in here https://bioconductor.org/packages/release/bioc/html/ggtree.html
The installation is works for a while
BiocManager::install("ggtree")
'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details
replacement repositories:
CRAN: https://cran.usk.ac.id
Bioconductor version 3.15 (BiocManager 1.30.18), R 4.2.1 (2022-06-23 ucrt)
Installing package(s) 'ggtree'
trying URL 'https://bioconductor.org/packages/3.15/bioc/bin/windows/contrib/4.2/ggtree_3.4.2.zip'
Content type 'application/zip' length 912374 bytes (890 KB)
downloaded 890 KB
package ‘ggtree’ successfully unpacked and MD5 sums checked
BUT, when I call the library, then the R said :
Error: package or namespace load failed for ‘ggtree’:
object ‘patchworkGrob’ is not exported by 'namespace:patchwork'
I also tried this thread to solve my problem but still like that >:(((
ggtree install
My latest R version is 4.2.1 (2022-06-23)
I couldn't reproduce this. Could you share your
sessionInfo()
? Or perhaps trying to reinstall patchwork and then library