Enter the body of text here Attempted to install bioconductor 3.15. Is there a way to check if it was successful? Then, attempted to install PCAtools.

Code should be placed in three backticks as shown below

> if (!require("BiocManager", quietly = TRUE))
+     install.packages("BiocManager")
> 
> BiocManager::install("PCAtools")
Bioconductor version 3.15 (BiocManager 1.30.18), R 4.2.1 (2022-06-23)
Installing package(s) 'PCAtools'
also installing the dependencies ‘sparseMatrixStats’, ‘S4Vectors’, ‘IRanges’, ‘ScaledMatrix’, ‘DelayedMatrixStats’, ‘DelayedArray’, ‘BiocSingular’, ‘BiocParallel’, ‘beachmat’

Warning: unable to access index for repository https://bioconductor.org/packages/3.15/bioc/bin/macosx/big-sur-arm64/contrib/4.2:
  cannot open URL 'https://bioconductor.org/packages/3.15/bioc/bin/macosx/big-sur-arm64/contrib/4.2/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.15/data/annotation/bin/macosx/big-sur-arm64/contrib/4.2:
  cannot open URL 'https://bioconductor.org/packages/3.15/data/annotation/bin/macosx/big-sur-arm64/contrib/4.2/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.15/data/experiment/bin/macosx/big-sur-arm64/contrib/4.2:
  cannot open URL 'https://bioconductor.org/packages/3.15/data/experiment/bin/macosx/big-sur-arm64/contrib/4.2/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.15/workflows/bin/macosx/big-sur-arm64/contrib/4.2:
  cannot open URL 'https://bioconductor.org/packages/3.15/workflows/bin/macosx/big-sur-arm64/contrib/4.2/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.15/books/bin/macosx/big-sur-arm64/contrib/4.2:
  cannot open URL 'https://bioconductor.org/packages/3.15/books/bin/macosx/big-sur-arm64/contrib/4.2/PACKAGES'
Packages which are only available in source form, and may need
  compilation of C/C++/Fortran: ‘sparseMatrixStats’ ‘S4Vectors’
  ‘IRanges’ ‘DelayedArray’ ‘BiocSingular’ ‘BiocParallel’ ‘beachmat’
  ‘PCAtools’
Do you want to attempt to install these from sources? (Yes/no/cancel) no
installing the source packages ‘ScaledMatrix’, ‘DelayedMatrixStats’

trying URL 'https://bioconductor.org/packages/3.15/bioc/src/contrib/ScaledMatrix_1.4.0.tar.gz'
Content type 'application/x-gzip' length 298044 bytes (291 KB)
==================================================
downloaded 291 KB

trying URL 'https://bioconductor.org/packages/3.15/bioc/src/contrib/DelayedMatrixStats_1.18.0.tar.gz'
Content type 'application/x-gzip' length 276219 bytes (269 KB)
==================================================
downloaded 269 KB

ERROR: dependencies ‘S4Vectors’, ‘DelayedArray’ are not available for package ‘ScaledMatrix’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/ScaledMatrix’
ERROR: dependencies ‘DelayedArray’, ‘sparseMatrixStats’, ‘S4Vectors’, ‘IRanges’ are not available for package ‘DelayedMatrixStats’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/DelayedMatrixStats’

The downloaded source packages are in
    ‘/private/var/folders/05/5ml458wd5rjdjym6f1c1y4h40000gp/T/Rtmpbwba9O/downloaded_packages’
Warning messages:
1: In install.packages(...) :
  installation of package ‘ScaledMatrix’ had non-zero exit status
2: In install.packages(...) :
  installation of package ‘DelayedMatrixStats’ had non-zero exit status
>

Running on M1 macbookpro. So 5 'warning' messages, 2 'ERROR' messages. What do I need to do to successfully install PCAtools here? Thanks.

include your problematic code here with any corresponding output

please also include the results of running the following in an R session

sessionInfo( )

> sessionInfo()
R version 4.2.1 (2022-06-23)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS Monterey 12.1

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] BiocManager_1.30.18

loaded via a namespace (and not attached):
[1] compiler_4.2.1 tools_4.2.1

See this