Cannot install anything through BiocManager::install()
1
0
Entering edit mode
Sasha • 0
@79685fdd
Last seen 3.5 years ago
Hong Kong

Hi everyone, I am using RStudio Version 1.4.1106. I wanted to install the "IsoformSwitchAnalyzeR" packages. The code I am using is as follows. I tried changing the cran, reinstalling R and Rstudio, the solutions from "https://stackoverflow.com/questions/6473831/readrdsfile-in-r" and nearly everything I can find online, but I still keep getting this warning.

What should I do? Thanks in advance.


if (!requireNamespace("BiocManager", quietly = TRUE)){
    install.packages("BiocManager")
}
BiocManager::install(version='devel')
BiocManager::install("IsoformSwitchAnalyzeR")

#I also tried:
if (!requireNamespace("devtools", quietly = TRUE)){
    install.packages("devtools")
}
devtools::install_github("kvittingseerup/IsoformSwitchAnalyzeR", build_vignettes = TRUE)

#But I keep getting this:
Error in readRDS(dest) : error reading from connection

sessionInfo( )
BiocManager • 1.5k views
ADD COMMENT
0
Entering edit mode
Kevin Blighe ★ 4.0k
@kevin
Last seen 16 days ago
Republic of Ireland

Hi, I believe the issue has been identified. Please see the answer here: Avoid upgrading BiocManager to 1.30.13; fix proposed

Kevin

ADD COMMENT

Login before adding your answer.

Traffic: 620 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6