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I have a question regarding consensus wgcna. I have three data of interest and want to build consensus network. The soft thresholding plot seemed to suggest different power (eg: if I choose to pick the smallest power that has fit R^2>0.8). For consensus wgcna analysis, is it appropriate to choose different power for individual data set?
Code should be placed in three backticks as shown below
# include your problematic code here with any corresponding output
# please also include the results of running the following in an R session
sessionInfo( )