Hello,

I have different fcs datafile from MoFlo Astrios, and I want to transform it into log.

I read the data with "read.FCS" from "flowCore" package but I haven't yet find a way to transform my data.

How can I do it ? Thank you

Céline

Hi,

Look at the function logTransform function and its example.

?logTransform

samp <- read.FCS(system.file("extdata",
   "0877408774.B08", package="flowCore"))
logTrans <- logTransform(transformationId="log10-transformation", logbase=10, r=1, d=1)
trans <- transformList('FSC-H', logTrans)
dataTransform <- transform(samp, trans)