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zyr123
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@zyr123-12051
Last seen 7.8 years ago
Hi,
I am new to TCGA dataset. Does anyone know where I can find and download the pulmonary function test (PFT) data for the LUSC and LUAD lung cancers in TCGA?
Thanks in advance!
Hi,
Take a look at the TCGAbiolinks package and the support tag related to it in this website. I've been using it a bit myself as you'll note. If you want the gene or exon counts, the coverage bigwigs or the exon-exon junctions check recount: https://jhubiostatistics.shinyapps.io/recount/ and http://bioconductor.org/packages/release/bioc/html/recount.html.
Best,
Leonardo