Hello,
I'm trying to use the 'M3D' package. I've tried with the Bioconductor 3.2 release and everything works fine as in the M3D tutorial.
But when I tried with the release 3.4 I get the following message:
> source("https://bioconductor.org/biocLite.R")
Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
> biocLite("M3D")
BioC_mirror: https://bioconductor.org
Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.1 (2016-06-21).
Installing package(s) ‘M3D’
Package which is only available in source form, and may need
compilation of C/C++/Fortran: ‘M3D’
These will not be installed.
I need to use the function 'readBedFiles' which is in the new version only. Do you have any idea on what's the problem and on how I can solve it?
Thank you very much for your time.
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I assume you are on Windows, as M3D is failing check on that OS. Since you didn't use the M3D tag for your question, it's possible that Tom Mayo, the maintainer for the package didn't see your question. You might consider emailing him directly and asking him to fix his package so it passes check on Windows. You can get his email at the M3D landing page.