Hi, How would I save the graphing results of, say, plotMA(fit) from limma to some jpeg/gif file? Thanks, g

Guoneng Zhong wrote: > Hi, > > How would I save the graphing results of, say, plotMA(fit) from limma to > some jpeg/gif file? jpeg("MA_plot.jpeg") plotMA(fit) dev.off() or if you are on windows plotMA(fit) savePlot("MA plot","jpeg") HTH, Jim > > Thanks, > g > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623

If you're going to use jpeg, be aware that the default quality is 75% If you want the best quality, set it to 100 -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch on behalf of James W. MacDonald Sent: Wed 11/05/2005 6:36 PM To: Guoneng Zhong Cc: bioconductor@stat.math.ethz.ch Subject: Re: [BioC] saving graphs Guoneng Zhong wrote: > Hi, > > How would I save the graphing results of, say, plotMA(fit) from limma to > some jpeg/gif file? jpeg("MA_plot.jpeg") plotMA(fit) dev.off() or if you are on windows plotMA(fit) savePlot("MA plot","jpeg") HTH, Jim > > Thanks, > g > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623 _______________________________________________ Bioconductor mailing list Bioconductor@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor