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Dear all,
I am using DESeq2 for differential gene expression analysis. But I am not able to understand I should I put sample information and condition for large set of data as I mention below. I am having around 36 sample consists of
- 2 contrasting genotypes: R316, R512
- 3 different davelopment stage : 5week, 7 week , 9 week
- 4 different tissue: embryo, endosperm, mesocarp, pericarp
- 2 biological replicate for each
Regards
Yogesh