Hi,
could somebody direct me to a routine that converts the XML data
packages to R data packages? Specifically I am looking for the
chromosome location of the genes corresponding to the probe sets in
U133B. I can write an XSLT myself but don't want to reinvent the
wheel,
and the conversion tool I have here (XML Spy) bitches about it being
non-valid.
Greetings
Johannes
>Hi,
>could somebody direct me to a routine that converts the XML data
>packages to R data packages? Specifically I am looking for the
>chromosome location of the genes corresponding to the probe sets in
>U133B. I can write an XSLT myself but don't want to reinvent the
wheel,
>and the conversion tool I have here (XML Spy) bitches about it being
>non-valid.
You do not to do that as a package for u133b is available now. Just
for your
information, a function called xml2DataPkg in AnnBuilder does what you
want.
Jianhua Zhang
Department of Biostatistics
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084
John Zhang <jzhang@jimmy.harvard.edu> [/89/Fri, Feb 21, 2003 at
08:20:10AM -0500]:
>
> You do not to do that as a package for u133b is available now.
Ah! My fault, I only checked the DKFZ mirror.
> Just for your
> information, a function called xml2DataPkg in AnnBuilder does what
you want.
Oh yes, another FM I didn't R thoroughly.
Sorry
Johannes
--
Johannes Hüsing There is something fascinating about science. One
gets
hannes@ruhrau.de such wholesale returns of conjecture from such a
trifling investment of fact. Mark
Twain
