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Dear biomaRt developers, Reporting, just as you have asked: > library(biomaRt) > mart <- useMart('ENSEMBL_MART_SNP',"hsapiens_snp_som") > mart.a <- listAttributes(mart) > attr <- subset(mart.a, grepl("sequences", page))$name > pdyn <- getBM( + attributes = attr, + filters = c("chromosomal_region"), values = list(chromosomal_region="20:1968757:2004285"), + mart = mart) V1 V2 V3 V4 V5 V6 V7 V8 V9 1 %COSMIC_MUTATION% 20 1980467 1980467 1 COSM477874 COSMIC COSMIC_MUTATION Phenotype_or_Disease 2 %COSMIC_MUTATION% 20 1980454 1980454 1 COSM1565883 COSMIC COSMIC_MUTATION Phenotype_or_Disease 3 %COSMIC_MUTATION% 20 1980472 1980472 1 COSM1326867 COSMIC COSMIC_MUTATION Phenotype_or_Disease 4 %COSMIC_MUTATION% 20 1980484 1980484 1 COSM3544459 COSMIC COSMIC_MUTATION Phenotype_or_Disease 5 %COSMIC_MUTATION% 20 1980442 1980442 1 COSM3963357 COSMIC COSMIC_MUTATION Phenotype_or_Disease 6 %COSMIC_MUTATION% 20 1980453 1980453 1 COSM1716135 COSMIC COSMIC_MUTATION Phenotype_or_Disease Error in getBM(attributes = attr, filters = c("chromosomal_region"), values = list(chromosomal_region = "20:1968757:2004285"), : The query to the BioMart webservice returned an invalid result: the number of columns in the result table does not equal the number of attributes in the query. Please report this to the mailing list. > sessionInfo() R version 3.3.1 (2016-06-21) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 14.04.4 LTS locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 [4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] biomaRt_2.28.0 loaded via a namespace (and not attached): [1] IRanges_2.6.1 parallel_3.3.1 DBI_0.4-1 tools_3.3.1 [5] RCurl_1.95-4.8 Biobase_2.32.0 AnnotationDbi_1.34.4 RSQLite_1.0.0 [9] S4Vectors_0.10.2 BiocGenerics_0.18.0 stats4_3.3.1 bitops_1.0-6 [13] XML_3.98-1.4