Hi limma users, I have a questions about the MA-plots. I try to save a number of graphs to one pdf-file which works for image-plots and PrintTip graphs but every time I try to save my MA plots I get a pdf with only text and boxes but all colour-spots have gone (in the legend as well as in the picture itself). Any suggestions how to get all the information into pdf-format? Thanxs, Anja -- Anja E. Schiel, Ph.D. Departments of General Internal Medicine and Human Genetics Leiden University Medical Center PO Box 9503 2300 RA Leiden The Netherlands tel: -31-(0)71-5276067 fax: -31-(0)71-5276075

I have had similar problems. If I use plotMA(.....,pch='.'), this seems to fix the issue for me. Sean On Mar 30, 2005, at 9:37 AM, Anja Schiel wrote: > Hi limma users, > > I have a questions about the MA-plots. > I try to save a number of graphs to one pdf-file which works for > image-plots and PrintTip graphs but every time I try to save my MA > plots > I get a pdf with only text and boxes but all colour-spots have gone (in > the legend as well as in the picture itself). > > Any suggestions how to get all the information into pdf-format? > > Thanxs, Anja > > > -- > Anja E. Schiel, Ph.D. > Departments of General Internal Medicine and Human Genetics > Leiden University Medical Center > PO Box 9503 > 2300 RA Leiden > The Netherlands > tel: -31-(0)71-5276067 > fax: -31-(0)71-5276075 > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor