Package lists and other questions about the site
2
0
Entering edit mode
@georgecarlisle-10073
Last seen 8.7 years ago

I'm new to the site and I'm trying to get some information out of the site. I need to be able to analyze the package lists but I can't seem to import them into Excel for analysis. Was this done intentionally?

Problem 1:

https://bioconductor.org/packages/release/bioc/

Problem 2:

https://bioconductor.org/packages/release/BiocViews.html#___Software

Problem 3: is this "Stat" feature live or still in development?

 
website r packages importing • 2.5k views
ADD COMMENT •
0
Entering edit mode

Problem 4: Can you make this site more friendly for images? When I have problems I need to get them fixed. Pictures are worth a thousand words and I wasted 1 hour doing this cutting and pasting stuff today.

https://onedrive.live.com/redir?resid=3464E92A98562930!107321&authkey=!AHuWjid3kKg_5lc&v=3&ithint=photo%2cpng

 

ADD REPLY •
0
Entering edit mode

Have you tried my suggestion? It won't give you any browser errors because it does not involve the use of a browser.

ADD REPLY •
2
Entering edit mode
Dan Tenenbaum ★ 8.2k
@dan-tenenbaum-4256
Last seen 5 months ago
United States

Most things are more easily done in R than by scraping web pages.

source("https://bioconductor.org/biocLite.R")
x <- available.packages(contrib.url(biocinstallRepos()['BioCsoft']))
write.csv(x, file="x.csv")

Then read in x.csv in excel. 

 
ADD COMMENT •
0
Entering edit mode

Hi Dan,

I've download it but it's a zipped package so I need to look at it. I'm in the middle something so I can't respond until later today.  

ADD REPLY •
0
Entering edit mode

This isn't it. It is a package but there was no .csv in it. I maybe doing this wrong and will look at again tomorrow.

ADD REPLY •
0
Entering edit mode
@georgecarlisle-10073
Last seen 8.7 years ago

This is it! Sorry. I don't know what happened the first. I named it file this time and it work.

Thanks for your help. I'm cleaning this file up now so I can print it out tomorrow.

Thanks again, Dan
ADD COMMENT •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 410 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6