Hello,
I am new at EdgeR. I have 6 RNA-Seq samples in different time points and I would like to find DE genes changes during developmental stages. my samples areĀ
Sample | Time | Tissue |
Sample1 | T1 | Liver |
Sample2 | T1 | Liver |
Sample3 | T2 | Liver |
Sample4 | T2 | Liver |
Sample5 | T3 | Liver |
Sample6 | T3 | Liver |
sample 1 and 2 are biological replicates and so on...
How can I find the DE genes?
I am also interested to extract the list of genes goes up or down in all stages.
Could you please help me with this?
Thanks
Simon