I got some warning messages when running Seqplots, and can not use the "web interface"
SeqPlots ready, type "run()" to start web interface (GUI) or "?getPlotSetArray" for console mode help.
Warning messages:
1: replacing previous import by ‘grid::arrow’ when loading ‘seqplots’
2: replacing previous import by ‘grid::unit’ when loading ‘seqplots’
Any ideas how to fix it? Thank you very much!
The sessioninfo is as follow:
R version 3.2.3 (2015-12-10)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 14.04.3 LTS
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=de_DE.UTF-8 LC_COLLATE=en_US.UTF-8 LC_MONETARY=de_DE.UTF-8
[6] LC_MESSAGES=en_US.UTF-8 LC_PAPER=de_DE.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats4 stats graphics grDevices utils datasets methods base
other attached packages:
[1] BSgenome.Athaliana.TAIR.TAIR9_1.3.1000 BSgenome_1.38.0 rtracklayer_1.30.1
[4] Biostrings_2.38.3 XVector_0.10.0 GenomicRanges_1.22.3
[7] GenomeInfoDb_1.6.2 IRanges_2.4.6 S4Vectors_0.8.7
[10] BiocGenerics_0.16.1 seqplots_1.8.0
loaded via a namespace (and not attached):
[1] Rcpp_0.12.3 RColorBrewer_1.1-2 futile.logger_1.4.1 plyr_1.8.3 class_7.3-14
[6] bitops_1.0-6 futile.options_1.0.0 tools_3.2.3 zlibbioc_1.16.0 digest_0.6.9
[11] jsonlite_0.9.19 RSQLite_1.0.0 gtable_0.1.2 shiny_0.13.0 DBI_0.3.1
[16] parallel_3.2.3 spam_1.3-0 gridExtra_2.0.0 stringr_1.0.0 maps_3.0.2
[21] fields_8.3-6 htmlwidgets_0.5 DT_0.1 grid_3.2.3 Biobase_2.30.0
[26] R6_2.1.2 plotrix_3.6-1 XML_3.98-1.3 BiocParallel_1.4.3 reshape2_1.4.1
[31] ggplot2_2.0.0 lambda.r_1.1.7 magrittr_1.5 MASS_7.3-45 Rsamtools_1.22.0
[36] scales_0.3.0 htmltools_0.3 GenomicAlignments_1.6.3 SummarizedExperiment_1.0.2 xtable_1.8-0
[41] mime_0.4 colorspace_1.2-6 httpuv_1.3.3 stringi_1.0-1 RCurl_1.95-4.7
[46] munsell_0.4.2 kohonen_2.0.19 Cairo_1.5-9
