Question

Illumina Sentrix HumanRef-8 Expression BeadChip annotation file

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kanacska ▴ 10

@kanacska-7375

Last seen 9.2 years ago

Hungary

Hi!

Im looking for annotation file for: Illumina Sentrix HumanRef-8 Expression BeadChip annotation file

I cant find it on illumina website and on bioconductor either.

Has anyone found it?

Thx,

Anna

illumina annotation • 2.7k views

ADD COMMENT • link updated 9.1 years ago by Mike Smith ★ 6.6k • written 9.1 years ago by kanacska ▴ 10

score 0 · Answer 1 · 2015-10-10

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kanacska ▴ 10

@kanacska-7375

Last seen 9.2 years ago

Hungary

* for human array

ADD COMMENT • link 9.1 years ago kanacska ▴ 10

score 0 · Answer 2 · 2015-10-10

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kanacska ▴ 10

@kanacska-7375

Last seen 9.2 years ago

Hungary

* for human array

ADD COMMENT • link 9.1 years ago kanacska ▴ 10

score 0 · Answer 3 · 2015-10-10

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andrew.j.skelton73 ▴ 370

@andrewjskelton73-7074

Last seen 7 months ago

United Kingdom

Have you considered lumiHumanAll.db? - This is an old array platform (as far as I'm aware). You should consider converting the probe IDs to nuIDs and map them to gene annotation that way.

ADD COMMENT • link 9.1 years ago andrew.j.skelton73 ▴ 370

score 0 · Answer 4 · 2015-10-13

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Mike Smith ★ 6.6k

@mike-smith

Last seen 8 hours ago

EMBL Heidelberg

The Human Ref-8 arrays contained a subset of the probes from the Human WG-6 platform, so you can use any annotation provided for them as well.

ADD COMMENT • link 9.1 years ago Mike Smith ★ 6.6k