package or namespace load failed for ‘targetscan.Mm.eg.db’
1
0
Entering edit mode
Assa Yeroslaviz ★ 1.5k
@assa-yeroslaviz-1597
Last seen 6 weeks ago
Germany

Hi,

I am having a problem u0loading the library ‘targetscan.Mm.eg.db’. I have installed it without problems, but when I try to load it, I get the error message:

package or namespace load failed for ‘targetscan.Mm.eg.db’.

Any reason for that error?

thanks

Assa

> library("targetscan.Mm.eg.db")
Error in .mergeMethodsTable(generic, mtable, tt, attach) :
  trying to get slot "defined" from an object of a basic class ("list") with no slots
Error: package or namespace load failed for ‘targetscan.Mm.eg.db’
> traceback()
2: stop(gettextf("package or namespace load failed for %s", sQuote(package)),
       call. = FALSE, domain = NA)
1: library("targetscan.Mm.eg.db")
> sessionInfo()
R version 3.2.1 (2015-06-18)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.10.4 (Yosemite)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] parallel  stats4    stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] targetscan.Hs.eg.db_0.6.1 microRNA_1.26.0           RmiR.Hs.miRNA_1.0.7      
 [4] miRNAtap.db_0.99.7        topGO_2.20.0              SparseM_1.7              
 [7] GO.db_3.1.2               graph_1.46.0              miRNAtap_1.2.0           
[10] gdata_2.17.0              org.Mm.eg.db_3.1.2        RSQLite_1.0.0            
[13] DBI_0.3.1                 AnnotationDbi_1.30.1      GenomeInfoDb_1.4.2       
[16] IRanges_2.2.7             S4Vectors_0.6.5           Biobase_2.28.0           
[19] BiocGenerics_0.14.0       ggplot2_1.0.1             BiocInstaller_1.18.4     
[22] biomaRt_2.24.0           

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.0       XVector_0.8.0     plyr_1.8.3        zlibbioc_1.14.0   bitops_1.0-6     
 [6] tools_3.2.1       digest_0.6.8      lattice_0.20-33   gtable_0.1.2      proto_0.3-10     
[11] stringr_1.0.0     Biostrings_2.36.4 gtools_3.5.0      grid_3.2.1        sqldf_0.4-10     
[16] XML_3.98-1.3      gsubfn_0.6-6      reshape2_1.4.1    magrittr_1.5      scales_0.3.0     
[21] MASS_7.3-44       colorspace_1.2-6  labeling_0.3      stringi_0.5-5     RCurl_1.95-4.7   
[26] munsell_0.4.2     chron_2.3-47     
targetscan namespace • 1.2k views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 9 hours ago
United States

It loads for me. Maybe try re-installing or start R using --vanilla.

ADD COMMENT

Login before adding your answer.

Traffic: 954 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6