Combine RankProd output Tables (up & down)
0
0
Entering edit mode
horcsct ▴ 10
@horcsct-7344
Last seen 9.0 years ago
Iran, Islamic Republic Of

Dear all,

The result of DEG analysis e.g. by limma is a sorted list by p-value for genes up or down regulated. But RankProd outputs two separate tables for up regulated genes and down regulated ones. How can I combine tables for obtain a single ordered list by their importance in the difference between two classes (case and control)? I need this list for Gene Set Enrichment analysis by Babelomic suite.

https://github.com/babelomics/babelomics/wiki/Gene%20Set%20Enrichment

Thanks.

RankProd • 1.2k views
ADD COMMENT

Login before adding your answer.

Traffic: 656 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6