Hi,

I am getting an error when I try to save an eset generated by SCAN.UPC  using write.table.

Here is my code:

gse53080 <- getGEO('GSE53080',GSEMatrix = TRUE)

write.table(gse53080, file = "NormalizedGSE53080.txt", sep = "\t")

Here is the error:

Error in data.frame(`GSE53080-GPL10999_series_matrix.txt.gz` = <S4 object of class "ExpressionSet">,  : 

  arguments imply differing number of rows: 35, 150

Calls: write.table ... as.data.frame -> as.data.frame.list -> eval -> eval -> data.frame

Execution halted

Please advise on how I should fix this.