Problems with autosomalRecessiveHomozygous
0
0
Entering edit mode
@clairesimpson-8464
Last seen 9.0 years ago

Hi,

I'm using autosomalRecessiveHomozygous to filter my sequence data and getting the following error message:

Error in if (any(slenVcf != slenBSgenome)) { : 
  missing value where TRUE/FALSE needed

I suspect the problem may be with my VCF file since the examples run fine, but don't know what the problem is in order to fix it. Any insight would be very helpful.

Many thanks,

Claire

 

VariantFiltering • 1.2k views
ADD COMMENT
0
Entering edit mode

Could you post the code you are trying, a few lines from your data, VCF file, and the output of sessionInfo()?

ADD REPLY

Login before adding your answer.

Traffic: 986 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6