Error with getBioC
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@michael-watson-iah-c-378
Last seen 10.2 years ago
Hi I just downloaded the latest version of R for Suse Linux 8.2 and I wanted to update all my bioconductor packages. I typed: getBioC(libName="default") And I got (finally) * DONE (reposTools) Loading required package: reposTools Loading required package: tools Error in Bundle(x) : No slot of name "Bundle" for this object of class "localPck". I must say that I dearly love the good ship Bioconductor and all who sail in it, but I have never ever, not in two years of working with bioconductor, managed to make getBioC() work :-S Mick
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Jeff Gentry ★ 3.9k
@jeff-gentry-12
Last seen 10.2 years ago
> I just downloaded the latest version of R for Suse Linux 8.2 and I > wanted to update all my bioconductor packages. By any chance is this install using the same library directory as the previous install? What I mean is, are you sure that you're not pulling in an old set of installed packages from your R? That is the most likely cause (and the only one I can think of offhand).
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