I posted recently regarding some error messages with LPE and just wanted to update in case anyone else was having problems with LPE. I have since been able to run LPE on my rma data files, but not mas5. Stephanie K. Mewborn, Ph.D. University of Chicago Department of Medicine, Section of Cardiology [[alternative text/enriched version deleted]]

Hi Stephanie, Could you please let me know the error you are getting with MAS 5? The preprocessing function in LPE package is just IQR normalization and log (2) transformation, so you should be able to use any normalization method with LPE. Regards, -N ______________________ Nitin Jain, PhD Non Clinical Statistics Pfizer, Inc. (Groton, CT) Bldg: 260, # 1451 Ph: (860) 686-2526 (Office) Fax: (860) 686-6170 -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch [mailto:bioconductor-bounces@stat.math.ethz.ch]On Behalf Of Stephanie Mewborn Sent: Monday, November 29, 2004 11:35 AM To: bioconductor@stat.math.ethz.ch Subject: [BioC] LPE errors I posted recently regarding some error messages with LPE and just wanted to update in case anyone else was having problems with LPE. I have since been able to run LPE on my rma data files, but not mas5. Stephanie K. Mewborn, Ph.D. University of Chicago Department of Medicine, Section of Cardiology [[alternative text/enriched version deleted]] _______________________________________________ Bioconductor mailing list Bioconductor@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor LEGAL NOTICE\ Unless expressly stated otherwise, this messag...{{dropped}}