Hi all,
I have a problem during the installation of worflows for the Annotating Genomi Variant.
I am using OS X Yosemite version 10.10.3.
When I run
source("http://bioconductor.org/workflows.R")
I get the error
Bioconductor version 3.0 (BiocInstaller 1.16.1), ?biocLite for help
Errore: BiocInstaller:::BIOC_VERSION == "3.1" is not TRUE
I read a post of a similar problem and it seems solved but for me it is still an issue.
Thanks for any help.
> sessionInfo()
R version 3.1.0 (2014-04-10)
Platform: x86_64-apple-darwin10.8.0 (64-bit)
locale:
[1] it_IT.UTF-8/it_IT.UTF-8/it_IT.UTF-8/C/it_IT.UTF-8/it_IT.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] BiocInstaller_1.16.1
loaded via a namespace (and not attached):
[1] tools_3.1.0
Not sure but the message suggests the workflows require Bioconductor version 3.1. You are running R 3.1.0 so you probably have Bioconductor 3.0. You may try installing R 3.2 and Bioc 3.1 then try again, or wait to someone with more idea than me to speak.