Question

Importing Bowtie result into R

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a.afshinfard ▴ 10

@aafshinfard-7617

Last seen 9.5 years ago

Iran, Islamic Republic Of

hi everyone

is there any way to read Bowtie alignment results into R automatically ?

specially i want alignment location and sequences in r

thanks

r bowtie • 1.7k views

ADD COMMENT • link updated 9.5 years ago by Sean Davis 21k • written 9.5 years ago by a.afshinfard ▴ 10

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Are your alignments in BAM format?

ADD REPLY • link 9.5 years ago Sean Davis 21k

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yes. SAM and BAM..

ADD REPLY • link 9.5 years ago a.afshinfard ▴ 10

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Hans-Rudolf

ADD REPLY • link 9.5 years ago Hotz, Hans-Rudolf ▴ 400

score 1 · Answer 1 · 2015-06-15

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Sean Davis 21k

@sean-davis-490

Last seen 3 months ago

United States

ADD COMMENT • link 9.5 years ago Sean Davis 21k