Hi I have a question. i have a mac and using osX I installed the R and then requested getbioc(), and a large list is being generated, howver, there are lots of red-error marks throught the process. here is an example /Library/Frameworks/R.framework/Resources/bin/SHLIB: line 1: make: command not found ERROR: compilation failed for package 'affy' or Warning message: Undefined slot classes in definition of "widgetView": winid(class "tkwin") in: .completeClassSlots(ClassDef, where) should i ignore them or do you have any suggestion what to do. oh, i have a mac just in case it is mac-specific thanks -- Sokol Haxhinasto Ph.D. Massachusetts Institute of Technology 77 Massachusetts Avenue Center for Cancer Research E17-121 Cambridge, MA 02139-4307 sokolh@mit.edu 617-324-8700 or 617-258-8308 Sokol Haxhinasto Benoist-Mathis Lab Immunology and Immunogenetics Department Joslin Diabetes Center One Joslin Place, Rm. 495 Boston, MA 02215 phone: (617) 713-3416 fax: (617) 264-2744 e-mail: Sokol.Haxhinasto@joslin.harvard.edu [[alternative HTML version deleted]]

On Fri, Nov 19, 2004 at 01:54:12PM -0500, Sokol Haxhinasto wrote: > Hi > I have a question. i have a mac and using osX > I installed the R and then requested getbioc(), and a large list is > being generated, howver, there are lots of red-error marks throught > the process. here is an example You should have a look at the R OS X FAQ, to use getBioC, you will need to install most of the developer tools. What you need and how it should be installed is described in some detail there. Your other option is to install OS X binaries - but right now they are not part of the automatic download. Robert > > /Library/Frameworks/R.framework/Resources/bin/SHLIB: line 1: make: > command not found > ERROR: compilation failed for package 'affy' > > or > > Warning message: > > Undefined slot classes in definition of "widgetView": winid(class > "tkwin") in: .completeClassSlots(ClassDef, where) > > should i ignore them or do you have any suggestion what to do. > oh, i have a mac just in case it is mac-specific > thanks > > > -- > Sokol Haxhinasto Ph.D. > Massachusetts Institute of Technology > 77 Massachusetts Avenue > Center for Cancer Research > E17-121 > Cambridge, MA 02139-4307 > sokolh@mit.edu > 617-324-8700 or 617-258-8308 > > Sokol Haxhinasto > Benoist-Mathis Lab > Immunology and Immunogenetics Department > Joslin Diabetes Center > One Joslin Place, Rm. 495 > Boston, MA 02215 > > phone: (617) 713-3416 > fax: (617) 264-2744 > e-mail: Sokol.Haxhinasto@joslin.harvard.edu > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- As of Nov. 22 - new contact details +--------------------------------------------------------------------- ------+ | Robert Gentleman phone: (206) 667-7700 | | Head, Program in Computational Biology fax: | | Division of Public Health Sciences office: M2-B865 | | Fred Hutchinson Cancer Research Center email: rgentlem@fhcrc.org | +--------------------------------------------------------------------- ------+