Whenever I try to load the aCGH library I get an error: Error in library(pkg, character.only = TRUE, logical = TRUE, lib.loc = lib.loc) : 'repeated' is not a valid package -- installed < 2.0.0? I have installed the "arrayCGH" library using getBioC successfully. I cannot find any information on this 'repeated' package. Is there anywhere I can download it? Neil [[alternative HTML version deleted]]

Christopher, Neil (NIH/NCI) wrote: > Whenever I try to load the aCGH library I get an error: > > > > Error in library(pkg, character.only = TRUE, logical = TRUE, lib.loc = > lib.loc) : > > 'repeated' is not a valid package -- installed < 2.0.0? > > > > I have installed the "arrayCGH" library using getBioC successfully. I > cannot find any information on this 'repeated' package. Is there anywhere I > can download it? Yes. library(reposTools) install.packages2("repeated") Should get you where you want to go. Jim > > > > Neil > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109

On Mon, Nov 15, 2004 at 12:17:21PM -0500, Christopher, Neil (NIH/NCI) wrote: > Whenever I try to load the aCGH library I get an error: > > > > Error in library(pkg, character.only = TRUE, logical = TRUE, lib.loc = > lib.loc) : > > 'repeated' is not a valid package -- installed < 2.0.0? > > And when you upgraded R to the 2.0.0 release you do not seem to have upgraded the packages. You must do so. The error message is pretty clear, get a new version of repeated. As for from where, the first thing to try is install.packages("repeated") which works for CRAN packages, or library(reposTools) install.packages2("repeated") which works for BioC packages. > > I have installed the "arrayCGH" library using getBioC successfully. I > cannot find any information on this 'repeated' package. Is there anywhere I > can download it? > > > > Neil > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- +--------------------------------------------------------------------- ------+ | Robert Gentleman phone : (617) 632-5250 | | Associate Professor fax: (617) 632-2444 | | Department of Biostatistics office: M1B20 | | Harvard School of Public Health email: rgentlem@jimmy.harvard.edu | +--------------------------------------------------------------------- ------+

Sorry if I am new to this stuff... I installed 'repeated' using the command: library(reposTools) install.packages2("repeated") But I am still getting the same error. > library(aCGH) Loading required package: repeated Error in library(pkg, character.only = TRUE, logical = TRUE, lib.loc = lib.loc) : 'repeated' is not a valid package -- installed < 2.0.0? -----Original Message----- From: Robert Gentleman [mailto:rgentlem@jimmy.harvard.edu] Sent: Monday, November 15, 2004 12:29 PM To: Christopher, Neil (NIH/NCI) Cc: 'bioconductor@stat.math.ethz.ch' Subject: Re: [BioC] Problems with aCGH library On Mon, Nov 15, 2004 at 12:17:21PM -0500, Christopher, Neil (NIH/NCI) wrote: > Whenever I try to load the aCGH library I get an error: > > > > Error in library(pkg, character.only = TRUE, logical = TRUE, lib.loc = > lib.loc) : > > 'repeated' is not a valid package -- installed < 2.0.0? > > And when you upgraded R to the 2.0.0 release you do not seem to have upgraded the packages. You must do so. The error message is pretty clear, get a new version of repeated. As for from where, the first thing to try is install.packages("repeated") which works for CRAN packages, or library(reposTools) install.packages2("repeated") which works for BioC packages. > > I have installed the "arrayCGH" library using getBioC successfully. I > cannot find any information on this 'repeated' package. Is there anywhere I > can download it? > > > > Neil > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- +--------------------------------------------------------------------- ------ + | Robert Gentleman phone : (617) 632-5250 | | Associate Professor fax: (617) 632-2444 | | Department of Biostatistics office: M1B20 | | Harvard School of Public Health email: rgentlem@jimmy.harvard.edu | +--------------------------------------------------------------------- ------ +