Entering edit mode
Auer Michael
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250
@auer-michael-953
Last seen 10.2 years ago
I am using Windows XP, R 2.0.0. and affy package 1.5.8
I have copied the files to the folder ?//Marvel-
xms4rmgc/festplatte/A2M
Lab/01 Customers/AKH/Erowic/data/filename.cel"
sample.names<- c("SCC9_A_0"," SCC9_A_C"," SCC9_A_N?,? SCC9_A_CN?,
"SCC9_B_0"," SCC9_B_C"," SCC9_B_N?,? SCC9_B_CN?, "SCC9_C_0","
SCC9_C_C","
SCC9_C_N?,? SCC9_C_CN?)
sample.files<-c(?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 A o.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 A c.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC9 A n.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 A c+n.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 B o.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 B c.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 B n.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102104_sampleSSC 9 B c+n.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102204_sample SSC9 C o.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102204_sample SSC9 C c.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102204_sample SSC9 C n.CEL?,
?//Marvel-xms4rmgc/festplatte/A2M Lab/01
Customers/AKH/Erowic/data/BE_102204_sample SSC9 C c+n.CEL?)
I am loading the library
library(affy)
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view,
simply type: openVignette()
For details on reading vignettes, see
the openVignette help page.
Loading required package: reposTools
Then I am using ReadAffy and the following error message occurs with
two
of the arrays.
pleca<-ReadAffy(filenames=sample.files,sampleNames =sample.names)
Error in initialize(value, ...) : Could not open file //Marvel-xm
4rmgc/festplatte/A2M Lab/01 Customers/AKH/Erowic/data/BE_102204_sample
SSC9 C n.CEL
What is the problem? Can anybody help. I can't go back to a former
release, because R 2.0.0. doesn't accept it.
Thanks