Hi Bioconductors, Aplolgies if this is a trivial question but it is my first time to analyze NGS data using R can any one clarify how to get GRanes() object with column Genes indicating which region (exons of experiment) belongs to which gene as in deepSNV example.. #========From deepSNV manual#========= Suppose the bam files are in folder ./bam and the regions of interest are stored in a GRanges() object with metadata column Gene , indicating which region (typically exons for a pulldown experiment) belongs to which gene. #============ Thank you very much in advance.. [[alternative HTML version deleted]]