r devel ????
1
0
Entering edit mode
@alberto-goldoni-711
Last seen 10.2 years ago
> getBioC(develOK=TRUE) Running getBioC version 1.2.64.... If you encounter problems, first make sure that you are running the latest version of getBioC() which can be found at: www.bioconductor.org/getBioC.R Please direct any concerns or questions to bioconductor@stat.math.ethz.ch. Please select an installation directory: 1:/usr/local/lib/R/site-library 2:/usr/lib/R/site-library 3:/usr/lib/R/library Selection: 2 Loading required package: reposTools Error in grep("[[:alpha:]]", vers) : couldn't find function "getRversion" WHY????????? HOW CAN I INSTALL DEVEL PACKAGE???? -- Dott. Goldoni Alberto
• 988 views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 13 minutes ago
United States
Alberto Goldoni wrote: >>getBioC(develOK=TRUE) > > Running getBioC version 1.2.64.... > If you encounter problems, first make sure that > you are running the latest version of getBioC() > which can be found at: www.bioconductor.org/getBioC.R > > Please direct any concerns or questions to bioconductor@stat.math.ethz.ch. > > Please select an installation directory: > 1:/usr/local/lib/R/site-library > 2:/usr/lib/R/site-library > 3:/usr/lib/R/library > Selection: 2 > Loading required package: reposTools > Error in grep("[[:alpha:]]", vers) : couldn't find function "getRversion" > > > > WHY????????? > HOW CAN I INSTALL DEVEL PACKAGE???? As has been noted several times in the past few days, you need to have the devel version of R installed in order to install the devel version of BioC. -- James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109
ADD COMMENT
0
Entering edit mode
On Tue, Sep 14, 2004 at 11:39:42AM -0400, James W. MacDonald wrote: > Alberto Goldoni wrote: > >>getBioC(develOK=TRUE) <snip> > >WHY????????? > >HOW CAN I INSTALL DEVEL PACKAGE???? > > As has been noted several times in the past few days, you need to have > the devel version of R installed in order to install the devel version > of BioC. Based on this, what about a line in getBioC, like if(develOK) cat("You have chosen the devel version of Bioconductor. Please note that this requires the devel version of R.\n") Hmm come to think of it, I guess this might be checked automatically in the next version, since it seems that R 2.0 will have a function echoing the version. -- Kasper Daniel Hansen, Research Assistant Department of Biostatistics, University of Copenhagen
ADD REPLY
0
Entering edit mode
> Hmm come to think of it, I guess this might be checked automatically in > the next version, since it seems that R 2.0 will have a function echoing > the version. I actually just updated the check in getBioC for minimum versions such that devel requires >= 2.0 (and release 1.4 requires >= 1.9).
ADD REPLY

Login before adding your answer.

Traffic: 947 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6