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Last seen 10.3 years ago
Hi,
I would like to analyse data from the Arabidopsis Gene 1.1 ST Array
Strip with the XPS package. I created a scheme and tried to load some
example data with with the function import.data(). This error message
will appear:
-------------------------
dataAll <- import.data(scheme.Ara, "AraGene1_1", celdir=celdir,
celfiles=celfiles)
Opening file </home> in <read> mode...
Creating new file
</home>...
Importing </home> as
<aragene_1_1_st_hybridization_rep_strip_1_a01.cel>...
Error: Number of data groups is not 1!
Error: CEL-file with version/magic number
</home> is not supported.
Fehler in import.data(scheme.Ara, "AraGene1_1", celdir = celdir,
celfiles = celfiles) :
error in function ???ImportData???
Zus??tzlich: Warnmeldung:
In import.data(scheme.Ara, "AraGene1_1", celdir = celdir, celfiles =
celfiles) :
characters [](){}.:# etc in 'celnames' will be replaced with '_'
----------------------------
Does XPS support this kind of cel files?
Regards,
Benedikt
-- output of sessionInfo():
sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=de_DE.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=de_DE.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=de_DE.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] xps_1.24.0
loaded via a namespace (and not attached):
[1] tools_3.0.2
> traceback()
Kein traceback vef??gbar
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