On 07/07/2014 12:51 PM, michael wrote: > Thank you very much Mike. > > > On Jul 7, 2014, at 12:04 PM, Mike <wjiang2@fhcrc.org> <mailto:wjiang2@fhcrc.org>> wrote: > >> It is because one of the dependency package('rgl` or `ks`) failed to >> install. You have to tackle that before you can install flowCore. >> But if you install from the latest bioc release(2.14), you shouldn't >> have this problem since we've removed these dependencies since >> flowCore 1.30.7 >> On 07/07/2014 10:46 AM, michael wrote: >>> Hello Mike, >>> >>> Thank you for your quick reply. When I use these commands on the >>> Ubuntu server I receive the message below. I have searched Stack >>> Overflow to try and better understand what this means. The package >>> is not installing. >>> Do you have any ideas how this can be remedied? Thank you very much >>> for your time and help. >>> >>> Sincerely, >>> >>> Michael Kalnoky >>> >>> The downloaded source packages are in >>> ‘/tmp/RtmpFCT8BO/downloaded_packages’ >>> Updating HTML index of packages in '.Library' >>> Making 'packages.html' ... done >>> Warning messages: >>> 1: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : >>> installation of package ‘rgl’ had non-zero exit status >>> 2: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : >>> installation of package ‘ks’ had non-zero exit status >>> 3: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : >>> installation of package ‘feature’ had non-zero exit status >>> 4: In install.packages(pkgs = pkgs, lib = lib, repos = repos, ...) : >>> installation of package ‘flowCore’ had non-zero exit status >>> >>> >>> On Jul 7, 2014, at 9:49 AM, Mike <wjiang2@fhcrc.org>>> <mailto:wjiang2@fhcrc.org>> wrote: >>> >>>> biocLite("flowCore") >>> >> > [[alternative HTML version deleted]]