It was the conflict that was causing the problem. I appreciate the help. Thanks, Matt On Tue, May 27, 2014 at 4:25 PM, Vincent Carey <stvjc@channing.harvard.edu> wrote: > since R CMD INSTALL indicated success installing to > > ˜/Library/Frameworks/R.framework/Versions/3.1/Resources/library > > why don't you set that in your .libPaths() before running library() > > again > > > On Tue, May 27, 2014 at 10:58 AM, Matthew Robert Paul <mattpaul@nyu.edu> > wrote: > >> Hi James, >> >> That was not the literal input I'm afraid. I used: >> library(BSgenome.Scersk1MvOV1), >> as you suggest. When I do this I get this: >> >> Error in library(BSgenome.Scersk1MvOV1) : >> there is no package called ‘BSgenome.Scersk1MvOV1’. >> >> I have talked to some people in my lab and they said that the comp is >> running two versions of R. I'm trying to run this all through R studio so >> perhaps the command line R and Rstudio version are not matching up. I >> don't >> have a clue if they're right, but I'm going to try on a different computer >> and see. >> >> Thanks for your speedy response, >> Matt >> >> [[alternative HTML version deleted]] >> >> >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor@r-project.org >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > [[alternative HTML version deleted]]