Genes Symbols lists question
0
0
Entering edit mode
@giovanni-calice-6415
Last seen 6 months ago
Italy
Hi Bioconductor Developers and Users, I'm using some of the Bioconductor packages to analize Illumina 450k data for identifying differentially methylated positions/sites and Genes associated with these ones. With the IMA package version 3.1.2, I've some lists as many as those annotated by it and these lists are indexed by the Genes Symbols/Names and then there are the statistical estimates and the Methylation level. I was able to get as many lists but this time indexed by the Cg ID so I got the differentially methylated positions associated with these Genes. Now I was wondering if there is the possibility to do the vice versa that is to get from lists indexed by the Cg ID (I got some lists of this type by dmpFinder in the Minfi package version 1.8.9) as many lists indexed by Genes Symbols/Names associated with these positions/sites. I'd appreciate any thoughts or suggestions. Thanks in advance, Giovanni [[alternative HTML version deleted]]
minfi minfi • 782 views
ADD COMMENT

Login before adding your answer.

Traffic: 1048 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6