Dear Madam/Sir,
I am a user of the R programm at the BF2i laboratory in Lyon. We are
doing
research on the microarrays, and use BioConductor for analyzing our
results. I
have installed the new version of R 1,9,1 and wished to install the
new version
of Bioconductor too. The coputer I am working with is a Mac and
fulfills all
the demanded caracteristics of the installation. But I have
encountered some
problems while downloading the libraries. Libraries like marray and
some other
are downloaded but "cannot be installed for they are not in any
repository". I
would appreciate if you could help me solve this problem.
Sincerely
Alexandra DUMITRU
> I am a user of the R programm at the BF2i laboratory in Lyon. We are
> doing research on the microarrays, and use BioConductor for
analyzing
> our results. I have installed the new version of R 1,9,1 and wished
to
> install the new version of Bioconductor too. The coputer I am
working
> with is a Mac and fulfills all the demanded caracteristics of the
A couple of questions ...
- By "installing Bioconductor", I am assuming that you are using
getBioC()? Can you cut & paste some of the relevant output from your
session?
- I'm not super familiar w/ the Mac style R, so my terminology is
probably
incorrect here, but are you using the R-aqua or the unix-style R?
That
could make a big difference.
> the libraries. Libraries like marray and some other are downloaded
but
> "cannot be installed for they are not in any repository". I would
I don't currently see a problem w/ the repository, using R-1.9.1, I
just
did a BioC install and all went well, including marray. Could you
give
more details?
Thanks
-J