Errors w/ getBioC()
0
0
Entering edit mode
@matthew-hannah-621
Last seen 10.3 years ago
I'm getting an error with R 2.0 devel, trying to install bioC devel. See below. It worked when I updated about a month ago but I tried last week and it didn't work, and again today, is there a problem at the moment? Cheers, Matt > source("http://www.bioconductor.org/getBioC.R") > > getBioC(develOK=TRUE) Running getBioC version 1.2.64.... If you encounter problems, first make sure that you are running the latest version of getBioC() which can be found at: www.bioconductor.org/getBioC.R Please direct any concerns or questions to bioconductor@stat.math.ethz.ch. [1] "Installing reposTools ..." Loading required package: reposTools Error in getBioC(develOK = TRUE) : default: targets affy, cdna and exprs. exprs: packages Biobase, annotate, genefilter, geneploter, edd, ROC, multtest, pamr vsn, and limma. affy: packages affy, affydata, annaffy, affyPLM, makecdfenv, and matchprobes plus 'exprs'. cdna: packages marray, vsn, plus 'exprs'. prog: packages graph, hexbin, externalVector. graph: packages graph, Rgraphviz, RBGL widgets: packages tkWidgets, widgetTools, DynDoc. design: packages daMA and factDesign externalData: packages externalVector and rhdf5. database: AnnBuilder, SAGElyzer, Rdbi and RdbiPgSQL. analyses: packages Biobase, ctc, daMA, edd, factDesign, genefilter, geneplotter, globaltest, gpls, limma, RMAGEML, multtest, pamr, wvalue, ROC, siggenes and splicegear. annotation: packages annotate, AnnBuilder, humanLLMappings KEGG, GO, SNPtools, makecdfenv and ontoTools. proteomics: packages gpls, PROcess and apComplex. arrayCGH: packages aCGH, DNAcopy, repeated, and rmutil. all: All of the Bio >
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy • 1.2k views
ADD COMMENT

Login before adding your answer.

Traffic: 426 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6