Entering edit mode
Venu Pullabhatla
▴
40
@venu-pullabhatla-5550
Last seen 8.0 years ago
Hi All
I am working on Illumina HumanOmni5MExome-4v1-1_A SNP array to
identify
CNV's and LOH's from this data. I have come across "crlmm" package
that
can do this and started following the "Preprocessing and Genotyping
Illumina Arrays for Copy Number Analysis" vignette. I realized that
the
crlmm package does not include CDF annotation for this Illumina array.
I
tried to find this on the Bioconductor site and did not succeed. Can
anyone please help me where I can find this annotation file or a way I
can prepare one myself. Any help is very much appreciated. Many
thanks.
Venu