Entering edit mode
Hi Paola,
I'm forwarding your question to the Bioconductor mailing list where,
hopefully, someone will be able to help you.
Cheers,
H.
-------- Original Message --------
Subject: [devteam-bioc] information about genefilter package
Date: Sun, 27 Oct 2013 19:58:27 +0100 (CET)
From: Maintainer <maintainer@bioconductor.org>
Reply-To: paola.orsini- at libero.it
To: maintainer at bioconductor.org
Hi,
I write you to have some information about genefilter package. I am a
biologist and a pre-doc student, I must admit that I am quite new to
microarray
data analysis and R. I'm analyzing Agilent single color gene
expression
data
and I'm using limma. I would like to filter my data and to identify
the
detected genes in a % of my samples (something like the "Present"
call). I
particular, I want to filter out the genes that have a lower
expression
level
than the background. I read that genefilter package has several
methods for
?ltering genes from microarray experiments, but I don't know which
function of
the package should I use. Could you give me any information about
this?
Thank you very much for your support.
Kind regards,
Paola Orsini
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