Entering edit mode
Hi Alejandro,
Currently, pathview does not take EC number as in put. But you may
convert EC to KEGG or Entrez Gene ID using KEGGREST package. Then use
mol.sum in pathview packge to map the EC based data to Gene ID based
data. For example:
library(KEGGREST)
hsa.ec <- keggLink("enzyme", "hsa")
headhsa.ec)
? pathview::mol.sum
HTH,
Weijun
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On Wed, 9/25/13, Alejandro wrote:
Subject: Pathview question
Date: Wednesday, September 25, 2013, 11:40 AM
Hi
Im interested in using your pathview package, but I would
like to use it using EC number as input. is this possible?
thanks
-- Alejandro