Entering edit mode
Gabriele Zoppoli
▴
50
@gabriele-zoppoli-5976
Last seen 10.2 years ago
Dear BioConductor Community
I couldn't find an answer to the following simple question anywhere: I
have
a list of 300some HGNC IDs, and I would like to retrieve their
transcript
and protein lengths. I cannot find any argument in the biomaRt
BioConductor
functions to do that or in the Ensembl biomart on the website either
Help me please!!! Thanks in advance
Gabriele
> sessionInfo()
R version 3.0.1 (2013-05-16)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=de_BE.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=de_BE.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=de_BE.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] biomaRt_2.16.0 BiocInstaller_1.10.3
loaded via a namespace (and not attached):
[1] RCurl_1.95-4.1 tools_3.0.1 XML_3.98-1.1
--
Gabriele Zoppoli, MD
Ph.D., Clinical and Experimental Oncology and Hematology
Visiting Researcher, BCTRL J.C. Heuson, Institut J. Bordet, Bruxelles
BE
Internal Medicine Resident, DiMI, IRCCS AOU San Martino IST, Genova,
IT
Former Guest Researcher, LMP, CCR, NCI, NIH, Bethesda MD
Tel: +39 010 353 7968
Mobile 1: +32 478 337 942
Mobile 2: +39 349 617 0129
Email: gabriele.zoppoli@unige.it
Alt. Email: zoppoli@gmail.com
Alt. Email 2: gzoppoli@libero.it
Alt. Email 3: gabriele.zoppoli@bordet.be
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