Hi, I have expression dataset (6 samples) with entrez gene id and gene symbol from Illumina company. Which bioconductor packages would be suitable for analysis? Thank you very much in advance. -- output of sessionInfo(): source("http://www.bioconductor.org/biocLite.R") biocLite("topGO") -- Sent via the guest posting facility at bioconductor.org.

You may try the gage package: http://bioconductor.org/packages/release/bioc/html/gage.html And pathview package: http://bioconductor.org/packages/release/bioc/html/pathview.html -------------------------------------------- On Tue, 9/10/13, kaushal Raj Chaudhary wrote: Hi, I have expression dataset (6 samples) with entrez gene id and gene symbol from Illumina company. Which bioconductor packages would be suitable for analysis? Thank you very much in advance.