I am getting no results with these 316 Entrez Gene IDs for arabidopsis... -- output of sessionInfo(): > g<-read.csv("tair_ids to gene_ids.csv",header=TRUE) > h<-as.character(g[,2]) > head(h) [1] "839235" "838362" "838961" "837091" "837455" "837543" > i<-enrichPathway(h, pvalueCutoff = 0.05,qvalueCutoff = 0.05) > summary(i) Mode NA's logical 1 -- Sent via the guest posting facility at bioconductor.org.

Hi, arabidopsis is not supported yet. On Thu, Aug 22, 2013 at 6:10 AM, dd [guest] <guest@bioconductor.org> wrote: > > I am getting no results with these 316 Entrez Gene IDs for arabidopsis... > > -- output of sessionInfo(): > > > g<-read.csv("tair_ids to gene_ids.csv",header=TRUE) > > > h<-as.character(g[,2]) > > > head(h) > [1] "839235" "838362" "838961" "837091" "837455" "837543" > > > i<-enrichPathway(h, pvalueCutoff = 0.05,qvalueCutoff = 0.05) > > > summary(i) > Mode NA's > logical 1 > > -- > Sent via the guest posting facility at bioconductor.org. > -- --~--~---------~--~----~------------~-------~--~----~ Guangchuang Yu, PhD Candidate School of Biological Sciences The University of Hong Kong Hong Kong SAR Blog: http://ygc.name Scholar Profile: http://t.cn/SUGn4e -~----------~----~----~----~------~----~------~--~--- [[alternative HTML version deleted]]