Entering edit mode
Ibrahim Emam
▴
50
@ibrahim-emam-5823
Last seen 10.4 years ago
Hi,
Apologies for the late reply. I am afraid some of the R objects
previously created on our website need to be regenerated. I tried to
load these experiments fresh by calling ArrayEspress() and they both
successfully loaded. If you haven't done so already, I urge you to
download the latest ArrayExpress package from development branch of
BioC (http://bioconductor.org/packages/2.12/bioc/bin/windows/contrib/2
.16/ArrayExpress_1.19.1.zip) and load these experiments by simple
running ArrayExpress("E-MEXP-744") ?etc
Hope that helps
Ibrahim
On 10 Feb 2013, at 18:46, "Mirza, Nasir" <nasir.mirza at="" liverpool.ac.uk=""> wrote:
> Hello
>
> For some datasets, ArrayExpress provides ExpressionSet objects with
extensions eSet.r. I am unable to load these, getting the following
type of errors (two examples):
>
> Example #1:
>
>> source("C:\\Users\\Nasir\\Downloads\\E-MEXP-744.eSet.r")
> Error in source("C:\\Users\\Nasir\\Downloads\\E-MEXP-744.eSet.r") :
> C:\Users\Nasir\Downloads\E-MEXP-744.eSet.r:41:7: unexpected symbol
> 40: mating_type_a
> 41: heart failure
>
> Example #2:
>
>> source("C:\\Users\\Nasir\\Downloads\\E-MEXP-3687.eSet.r")
> Error in source("C:\\Users\\Nasir\\Downloads\\E-MEXP-3687.eSet.r") :
> C:\Users\Nasir\Downloads\E-MEXP-3687.eSet.r:11:1: unexpected input
> 10:
> 11: ?
> ^
>
> I would be grateful for advice on how to load these files.
>
> Thank you
>
> Nasir
>
>
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>
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